Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015936275.1_cds_XP_016481904.1_73184
CDS Infomation

[gene=LOC107802842] [db_xref=GeneID:107802842] [protein=LON peptidase N-terminal domain and RING finger protein 1-like] [protein_id=XP_016481904.1] [location=join(95368..95454,95620..95721,96987..97069,97236..97320,97410..97496,97871..97932,98062..98243,98360..98420,98782..98959,99448..99486,99579..99640,99758..99794,100320..100369,101204..101273,101738..101810,102291..102367,102452..102520,103048..103107)] [gbkey=CDS]
Sequence

ATGTCCGGCGACGCTTCTGCTTCTGTTTCTGTTTCTTCTTCTGGGTTTTGTTTAGAGGGG
CTTGATGATGTTCAAGATTATCCATGGGCGAATGAAGGAGAGCCATCTATGTCGTGGGAT
AGGTATAGTCATCTATACGATATTGTGCAAACGGGCAACAAAGCATACCGTGAGAACAGA
TGGGACGAGGCTATCAATTGTTACACAAGAGCTAACAACACTAGGCCAAATGACCCTATC
ATTCTTAGCAACAGATGCGCTTCGTACCTCAGGTTTAGCCAATTTCTGAAAAGTAGAACT
GCATCAGATTCAGAATACAGGCCATTGAGTGGGTTGGATCCTACAACGCTTGCTGGGCTT
GCGTTAAAGGATGCTGAGAAGGTGATGCATCCACAGAACAATTCAGTAAACTCATATATT
CTGAAGGCAAACTCACTCATTTTGTTAGAAAAAAATGAGCTAGCCCAAGATGTAATCCGT
TCAGGCCTTCAAGTGAATCCTTTAAGCAATCCCCTTCTAAATTTGGAGAAATGGATCAAA
GCTACACTTGGAACGAGAATCCACGGGAGACCACAGCGCAGTGATGATTTTGACTGTACT
CTGTGCTTAAAGCTATTATATGAACCTATAACAACTCCTTGCGGACATTCTTTTTGCCGT
GCATGCCTCTTCCAATCAATGGACCGATATAACAGATGCCCATTGTGCCGAACAGTTCTT
TTCATTAGTCCCAGAACATGTGCAATCAGTGTAACATTGAATAACATAATAGAAAAGACT
TTTCCTGAGGAATATGTTGAAAGGAAGGCTGAGAATGACAGTCTGATAAACCTTGGTGTT
GACTTGCTGCCTCTTTTTGTCATGGACGTTATTCTACCATGCGAGAAGCTTGCACTTAAC
ATTTTTGAACCTCGTTACAGACTTATGGTTAGGAGGATAATGGAAGGAAATCGTCGAATG
GGAATGGCTGTTGTTGATCCTACGACTGGTTCGATAGCTGATTGTGCTTGTGAAGTGGAG
ATTATAGAATGTGAGCCACTTCCAGACGGGCGTTTCTATCTGGAGGTTGAAAGTCGACGT
AGATGTCGCATCGTACGATATTGGGATCAAGACGGGTATCGTGTTGCTGAGGTTGAATGG
ATACAGGATATATGCCCAGCCGAAGGAACAAGAGAGAGGCATGAATTACTGGAGATGGCA
AATAAGGCGGCAGCATTTGCTCAACAGTGGTTGAGGAACGCACAAGAAGTGGCAGGAGAT
CGTAGACGTGCAGAACTCTTCAAAGCAGAAGGATTGATGCCATCGCCGCAGGATCCTGAG
CGTTTAAGTTTTTGGCTTACAACTCTGACCAGTCGTAGACCAACAGAGAAATTAGACCTG
CTTCAGATCAGAGATACACATGAGAGGATAAGGCGAGGACTCCTATACATGAAAGCAGAA
GAACAAGGATGCCGACTGCAATAA

Peptide Sequence

PEP ID

XP_016481904.1
PEP Infomation

PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Nicotiana tabacum]
Sequence

MSGDASASVSVSSSGFCLEGLDDVQDYPWANEGEPSMSWDRYSHLYDIVQTGNKAYRENR
WDEAINCYTRANNTRPNDPIILSNRCASYLRFSQFLKSRTASDSEYRPLSGLDPTTLAGL
ALKDAEKVMHPQNNSVNSYILKANSLILLEKNELAQDVIRSGLQVNPLSNPLLNLEKWIK
ATLGTRIHGRPQRSDDFDCTLCLKLLYEPITTPCGHSFCRACLFQSMDRYNRCPLCRTVL
FISPRTCAISVTLNNIIEKTFPEEYVERKAENDSLINLGVDLLPLFVMDVILPCEKLALN
IFEPRYRLMVRRIMEGNRRMGMAVVDPTTGSIADCACEVEIIECEPLPDGRFYLEVESRR
RCRIVRYWDQDGYRVAEVEWIQDICPAEGTRERHELLEMANKAAAFAQQWLRNAQEVAGD
RRRAELFKAEGLMPSPQDPERLSFWLTTLTSRRPTEKLDLLQIRDTHERIRRGLLYMKAE
EQGCRLQ

Transcript Sequence

Gene sequence data has not been registered.